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Best Sites

http://www.jewishgen.org/ The Official Home of Jewish Genealogy
http://www.jewishgen.org/databases/cemetery/ (JewishGen Online Worldwide Burial Registry)
http://www.jri-poland.org (Jewish Records Poland)
http://www.stevemorse.org/ The best site for One Step search forms and information

http://www.cyndislist.com/ The best organized directory of over 236,050 genealogy sites.
http://www.cyndislist.com/jewish Jewish genealogy section
http://www.pbclibrary.org/research/genealogy Palm Beach County Library (Heritage Quest, Ancestry.com, etc.)
https://familysearch.org/ (Databases - The Church of Jesus Christ of Latter-day Saints) 

General Research

http://ssdmf.info/ Social Security Death Master File
http://www.archives.gov/ US National Archives and Records Administration (NARA)
http://www.ancestry.com/ Fee based; free if accessed at Palm Beach County Library
www.avotaynu.com Current research books. Genealogy articles, newsletter etc.
http://jewishdata.com Non-free site with gravestone pictures from several areas. Searches free.
http://www.acpl.lib.in.us/ Allen County Public Library, IN. Excellent source for mid-west genealogy
http://www.hias.org/ Hebrew Immigrant Aid Society
http://www.museumoffamilyhistory.com The Museum of Family History http://www.olivetreegenealogy.com/index.shtml Free databases for passenger lists, military records, etc
http://www.routestoroots.com/ Miriam Weiner’s site for Jewish research in Poland, Ukraine, Moldova, etc. 
http://www.rootsweb.ancestry.com Large free genealogical research site
http://www.shoahconnect.org/ Allows an email address to be associated with a Yad Vashem page of testimony
http://www.crarg.org/search-holocaust-records.php Holocaust records from the Czestochowa-Radomsko Area Research Group
http://www.crarg.org/search-holocaust-records.php
http://www.yadvashem.org/ Holocaust Memorial Site
http://www.yadvashem.org/wps/portal/ Data Base-Pages of Testimony
http://ufdc.ufl.edu/ethnicnews/ Ethnic Newspaper from Florida
http://www.yivoinstitute.org/ Yivo Institute for Jewish Research

British–Dutch–South Africa-French Research

http://www.rootsweb.ancestry.com/~websites/international/uk.html
http://www.worldgenweb.org/
http://freecen.rootsweb.com/ (Census data)
http://freereg.rootsweb.com/ (parish Registers)
http://www.genuki.org.uk/ (UK and Ireland genealogy)
http://freebmd.rootsweb.com/ (births, deaths, marriages)
http://www.dutch-jewry.org/
http://www.sagenealogy.co.za/
http://www.genami.org/en/ (French databases in English)

Passenger Lists

http://immigrantships.net/index.html 1820-1940s arrival at US Ports from Europe
http://www.passengerlists.de Bremen Passenger Lists

New York Research

http://www.archives.gov/northeast/nyc/new_york.html Regional site of National Archives
http://forgotten-ny.com/  Images and info of NY from years ago
http://www.italiangen.org Surname Database , NYC Death Index; Groom Index and more
http://www.bklyn-genealogy-info.com Brooklyn data bases.
http://www.brooklynpubliclibrary.org/eagle/ Brooklyn Daily Eagle 1841-1902
http://www.jgsny.org/ Jewish Genealogical Society NY

Sephardic Research

http:// www.sephardim.com/
http://www.sephardicgen.com/

Search Engines & Look-Ups

http://www.google.com/
http://www.mocavo.com
http://www.anywho.com/whitepages/
http://www.switchboard.com
http://www.411.com/

Other Lists

http://www.cjh.org Center for Jewish History (see Fact Sheets)
http://articles.usa-people-search.com/content-big-list-of-genealogy-links.aspxBig List of Genealogy Links

Miscellaneous

http://www.onlinenewspapers.com/
http://350th.org/ 350 years of American Jewish History
http://www.donslist.net/PGHLookups/HomePage.shtml/ Online City Directories and much more
http://yizkor.nypl.org/index.php/ New York City Public Library Yizkor Books

Maps

http://maps.google.com/
http://www.bing.com/maps
http://www.mapblast.com/
http://maps.yahoo.com/
http://www.fallingrain.com/world/
http://www.lib.berkeley.edu/EART/x-ussr/ukraine.html (Ukraine)

Blogs and Newsletters

http://tracingthetribe.blogspot.com/  Tracing the Tribe: The Jewish Genealogy Blog
http://blog.eogn.com/eastmans_online_genealogy/ Eastman's Online Genealogy Newsletter
http://yourjewishgem.blogspot.com/ Marilyn Robinson's "Jewish Gems Genealogy" blog
http://www.avotaynu.com/nuwhatsnew.htm "Nu? What's New?" The E-zine of Jewish Genealogy